Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMYRVLLVLALLTSSNLNALINYSKPISVDSRIKTFVYSPNEVFTVIFSQGYYSYIEFAEGEKVKNIAVGDASSWRISPYDNKLLIMPFEVSSRTNMIITTTKKRNYIFDLISRPNYDKYPDTDAEKVSHDYSAEKDISYVVRFYYPKEEDEFDIDLDEISAPTQMQYVVDRPEKIIQENDTKYNYTYIDEGGNADMIPIELFDDGYLTYFKFRD----SNKIPQIFAK--D-GKTRLPCKRLLFDGYVIIKGVHKKLFMRYENDEVEIINRSL |
| 2N01 Chain:B ((12-104)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRY-YYDYDYATRTK--KSWLIPSRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVE-GNTLIVHGTYPFLVVRHGDNVVGLRRNKQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2N01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25520 for 590 contacts (-43.3/contact) +
2D Compatibility (PS) -9068 + (NN) 667 + (LL) 11924
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -27697.0 ( -46.94 by residue)
QMean score : 0.516
|
|
|