Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQATYASISLPGISSVEDVLEDARFGKLFILVDDENRENEGDLIVLAEKLKPEHVAFMVRYGTGIVFLAMTRLHMGRLGLEFMRRSNIDEKLTPHTAFTTSIDARYGIATGVSAHDRTHTILTAIDGKSTQDDIITPGHVFPIIANDGGVLARNGHTEASVEIAKLIGYNHAAVGCELVNDDGSMMRLPELLKFAEQHNIKLTTIDKLIRYIKKLS
4P6P Chain:B ((33-228))
-------------ITRVENALQALREGRGVLLLDDEDRENEGDIIYAVESLTTAQMALMIRECSGIVCLCLTEAQADRLALPPMVVNNNSAN---QTAFTVSIEAKHGVTTGVSAQDRVTTIKTAANPQAKPEDLARPGHVFPLRARAGGVLARRGHTEGTVDLMQMAGLQPAGVLCELTNPDGSMAKTPEIIEFGKLHNMPVLTIEDMVQYRIQFD
General information:
TITO was launched using:
RESULT:
Template:
4P6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139772 for 1664 contacts (-84.0/contact) +
2D Compatibility (PS) -21184 + (NN) -6622 + (LL) 1052
1D Compatibility (HY) -13200 + (ID) 4450
Total energy: -184176.0 ( -110.68 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_4P6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P6P-query.scw
PDB file :
Tito_Scwrl_4P6P.pdb
: