Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEV--------GAG-TL---HP---ATIMS---------------AIDVKPTKIAYLQPVVRPADGRYGDNPNRLYQHHQYQVI--IKPS---GNNLQDVYLSSLRALGISTEKYDIKFIEDDWENPSVGASGLGWEVTCNGMEVTQLTYIQ---QI-G-SINC-RIIPGEVAYGLERLAMCIQGVNNVYDIIWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 3DSQ Chain:A ((74-273)) | ---LELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIRIFEIGTCYRKESQG----AQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIRE----FELVTESSVVY-----GDTVDVMKGDLELAS---GAMGPHFLDEKWEIFDPWVG-LGFGLERLLMIREGTQHVQSMARSLSYLDGVRLNI---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82757 for 1027 contacts (-80.6/contact) +
2D Compatibility (PS) -17490 + (NN) -7044 + (LL) 7668
1D Compatibility (HY) -6800 + (ID) 1350
Total energy: -107773.0 ( -104.94 by residue)
QMean score : 0.386
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