Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNAKRKVVIYIKQYCPFCKRAKELLDEKGVKYEEIDVFKNSD---LFSNIKLKYNVRTVPQIFIADKNGNYVHHIAGCDKLMDLEREGKLDDMLSTNYDKTDVTTYTSNSDEYEEYVASHDDFM
3UIW Chain:B ((49-130))
-------VVIFSKTTCPYCKMAKGVFNEIGATYKVVELDEHNDGRRLQETLAELTGARTVPRVFI---NGQC---IGGGSDTKQLHQQGKLLPLIEQCRPCCL----------------------
General information:
TITO was launched using:
RESULT:
Template:
3UIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70394 for 573 contacts (-122.9/contact) +
2D Compatibility (PS) -8241 + (NN) -2100 + (LL) 1700
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -85685.0 ( -149.54 by residue)
QMean score : 0.776
(partial model without unconserved sides chains):
PDB file :
Tito_3UIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UIW-query.scw
PDB file :
Tito_Scwrl_3UIW.pdb
: