Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKYIVFVLSYILGSIPFSLVITKIKGINLREVGSGNIGATNVART-GSKCIAALALLLDSLKGFIAVYIAKQFFDDGSFHMYASAILVVLGHMFPVWLKFSGGKGVATTLGILIALNISLVLAFVFVWLAVFFAFRYSSLASLTSTIAAVLSSFFFQRDLFFTLLTVAILIFFKHYRNIVNLLQGRERKFS |
1F4S Chain:P ((1-65)) | ---------------------------GSMADTRRRQNHSCDPCRKGKRRCDAPENRNEANENGWVSCSNCKRWNKDCTFNWLSSQRSKNSS---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25621 for 402 contacts (-63.7/contact) +
2D Compatibility (PS) -6361 + (NN) 1831 + (LL) 12444
1D Compatibility (HY) 3600 + (ID) 400
Total energy: -14507.0 ( -36.09 by residue)
QMean score : 0.192
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