Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGINNFMNEVLFFK------IFYVPFIILLVAFGYIFLTLRFKFLNIRMFKHAFTILCGKYDTDHHDGHITHFQAFVIALSSTVGLGT-VAGVAIAVSMGGPGAIPWMMITGFFGMSAKFAEVTLAFRHRTEGQEQLFSGPFQYIRN-GLEEFGFKKLGIILAAVYA------VFFVLSG-----LGGSVAFQTNQMVSILSGYSNWVDSHPWFLSSIISALLALV----IIGGIRRIARVSSALVPVMSLIYIF--------------SCITIITFNIHNFSNVFKILFS---NMIDFNAVGGGVVGAF-VAGIQRAIFASEAGVGSASITH---AVAKDEEPVRTGLVAMIEPCFDTMLICCLTGITIVITGAYQTGIGEGILVTQKAFE---TVSSWFPI--FLIIAAPLFAFSSVISFVYCCEMGWLYLFGAKSI-VIYRIAVVVVAFFSGLSKDIMAIANIGGTLFSCLALINMTALILF---SSQINDEVQCYSKRLRNNKIN-- |
| 4PW2 Chain:A ((72-585)) | RYEEIDCLINDDATIKGRREGSEVYMPFSWMEKYFEVYGKVVQYDGYDRFEFSHSYSKVYAQREQYHPNGVFMSFEGYNVEVRDRVKCISGVEGVPLSTQWGPQG-YFYAIQIAQYGLSHYSKNLTERPPHVEVYDTAEERSAWTVPKGCSLTRVYDKTRATSVREFSAPENSEGVSLPLGNTKDFIISFDLKFTSNGSVSVILETTE--KGPPFVIHYVTTTQLILLKDRDITYGIGPRTTWTTVTRDLLTDLRKGIGLSNTKAVKATKTMPRRVVKLVVHGTGTIDNITISTTSHMAAFYAASDWLVRNQDERGGWPIMVTRKLGEGFRALEPGWYSAMAQGQAMSTLVRAYLMTKDDRYLKAALRATGPFKLPSEQHGVKAVFMNKYDWYEEYPTIPSSFVLNGFIYSLIGLFDLAQTAGEKLGRDAGQLYSKGMESLKVMLPLYDTGSGTIYDLRHFILGTAPNLARWDYHTTHINQLQLLGTIDNSPIFRDSVKRWKSYLKGGRAKHN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -404954 for 3503 contacts (-115.6/contact) +
2D Compatibility (PS) -47149 + (NN) 4470 + (LL) 492
1D Compatibility (HY) -10000 + (ID) 3850
Total energy: -460991.0 ( -131.60 by residue)
QMean score : 0.202
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