Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDLTRVANLIKKDV---DKGYRIIVVVSAIAGLTDQMVFQARQTLNLSHKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIKIDHLKRSFAEGYTVAIIAGFQGIYDDR--ITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKEVEGTAVLH--ENDVLERHTITGITYSTNEALITFTNFAN----TLRTLKDMAGANIKIDMI--HGSSIVISEFDI-------------DLMKELLNKNE--DYVINNNAAKISIIGIGVMSVMYHTLKF---FSEKKIEILAITASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 3AAW Chain:C ((3-405)) | -------------------LVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAR---EMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQ---------------DVTPGRVREALDEG-KICIVAGFQGVNK--RDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMEDIPVEEAVLTGVATDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVQGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQLGG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AAW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -288133 for 2820 contacts (-102.2/contact) +
2D Compatibility (PS) -38512 + (NN) -13925 + (LL) 2888
1D Compatibility (HY) -25200 + (ID) 6350
Total energy: -369232.0 ( -130.93 by residue)
QMean score : 0.466
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