Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINWQAKDPEGNSINCSMTVKVGSGGIQSATGGFGVSKFKSPLPEGKKSEILKLVEQNKEVFISGKTLYKAFTDVGQSVDD
3S6P Chain:E ((1-33))
---------------------------FAAAVSAFAANMLSSVLKSEATSSIIKSVGETA----------------------
General information:
TITO was launched using:
RESULT:
Template:
3S6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5816 for 126 contacts (46.2/contact) +
2D Compatibility (PS) -3176 + (NN) 2206 + (LL) 2076
1D Compatibility (HY) -2000 + (ID) 400
Total energy: 4522.0 ( 35.89 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_3S6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S6P-query.scw
PDB file :
Tito_Scwrl_3S6P.pdb
: