Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPRYSRKEISAIWEENNKFNIWLKIERLACEAQAKLGVIPSNVAKRLSGAITFDVERINEIESTVKHDVIAFLTYIAEKVGVDV-RYLHYGMTSSDVLDTCFAVQLKESCNILLENLKNLLAALKKKAEDYKGTICVGRSHGMHAEPTTLGLKFTRFYAEFKRSYQRLINAQKEISICKISGAVGNFANVDPFVEEYVAKGMELVPETISSQVIPRDRHAMFFSVLGVIASSMENVAVEIRHLQRTEIAEIAEYFSTGQKGSSAMPHKCNPILSENLTGLSRLIRSYVSPALENVVLWHERDISHSSVERCIAPDACILMDFALVRLTDLIDKLAINKENIEKNLNSSKGLIFSQRILLELVNSGLTREEAYKIIQGNAMKVKQNNSDFLFELKQ----DRSLLEVINSEKLESLFDLKYYTKYVDHIYKKVFD |
| 4EEI Chain:B ((1-428)) | MIKRYDVAEISKIWADENKYAKMLEVELAILEALED-RMVPKGTAAEIRARAQIRPERVDEIEKVTKHDIIAFCTSIAEQFTAETGKFFHFGVTSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKDFQKDGLTVQFSGAVGNYCILTTEDEKKAADILGLPVEEVSTQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHRSDVFEVYEGF------------KKNPISTENLTGMARMLRSHVSIALENCVLWHERDISHSSAERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVAFDL---ES-FSKKLQKVMHDEHNIILDIPEMDFEGI--KKTYLKEIDHVFDRSVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204517 for 3248 contacts (-63.0/contact) +
2D Compatibility (PS) -43333 + (NN) -17131 + (LL) 324
1D Compatibility (HY) -31200 + (ID) 8400
Total energy: -304257.0 ( -93.68 by residue)
QMean score : 0.527
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