Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILISLLFILIFYSSANAFTLDDKLRDKNMEKRATNLFEMIKCPICSGESLSESGSQVAYNMRKMIREKISDGYTDEQITSELRNSYGDSIIIVPPVKFSTYILWLIPLVIPLIGCFLIRNIIK
2V75 Chain:A ((28-57))
-----------------------------------------------------------IKYVAEYIVLLIVNGGTVESVVDELASLFDSVSRDTLANVVQTAFFALEALQQGESAENIVSKIRM
General information:
TITO was launched using:
RESULT:
Template:
2V75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3457 for 141 contacts (-24.5/contact) +
2D Compatibility (PS) -3386 + (NN) -1393 + (LL) 4596
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -5990.0 ( -42.48 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_2V75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V75-query.scw
PDB file :
Tito_Scwrl_2V75.pdb
: