Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSVTFILPDGSKKSYEAAEGETLLNLAHRSDPDLLE-GACEGSLACSTCHVIIDQNFYDAVETHNPISDEENDMLDLAFSLTETSRLGCQIKITKDIDGLCVTIPKGTRNISLDKQGND
1CJE Chain:C ((7-107))
--TVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLE---AITDEENDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRVPDAV-----------
General information:
TITO was launched using:
RESULT:
Template:
1CJE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63192 for 726 contacts (-87.0/contact) +
2D Compatibility (PS) -11226 + (NN) -5632 + (LL) 508
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -92792.0 ( -127.81 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1CJE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CJE-query.scw
PDB file :
Tito_Scwrl_1CJE.pdb
: