Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLVGKDTRLICQGFTGAQGTFHSEQAISYGTKMVGGVTPGKGGSSHLNLPVFNTVAEAKEKTDANATVIYVPAKFAAAAILEAIDAEIELIVCITEGIPILDMVRVKHALISSKSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGPGQSTCIGIGGDPIHGMTFVDCMELFLKDEDTHGIVVIGEIGGNEEEDVSHFVKTEKTKKPIVGFIAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMSSAGIAIAETPAMIGKKILEVMHKAHVA |
| 1JKJ Chain:D ((1-287)) | -SILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIK-EHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224884 for 2789 contacts (-80.6/contact) +
2D Compatibility (PS) -31850 + (NN) -21073 + (LL) 892
1D Compatibility (HY) -29200 + (ID) 9050
Total energy: -315165.0 ( -113.00 by residue)
QMean score : 0.573
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