Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENKLREIVLDTETTGLDIESGHRIIEIGCVELINRIPTGKVFHKYLNPERDIPYHSFKIHGISEEFLEDKPLFSDVVFEFLDFISGDILIIHNAEFDIKFLNMELGKLNARLISSDRVLDTLPLARKKFVGSPASLSALCKRFDISLENRELHGALTDAGLLAKVYVELTGGLQTFLFDNECKQDHNSAFIQHKVRNLTCREHSPSNEEINEHRKLLGKIDNPLWKERIE
2P1J Chain:A ((357-520))
-----TFVVLDFETTGLDPQV-DEIIEIGAVKIQGGQIV-DEYHTLIKPSREISRKSSEITGITQEMLENKRSIEEVLPEFLGFLEDSIIVAHNANFDYRFLRLWIKKVMGLDWE-RPYIDTLALAKSLLKLRSYSLDSVVEKLGLGPF--RHHRALDDARVTAQVFLRFVEMM---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2P1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81136 for 1055 contacts (-76.9/contact) +
2D Compatibility (PS) -17359 + (NN) -7094 + (LL) 3660
1D Compatibility (HY) -14800 + (ID) 2750
Total energy: -119479.0 ( -113.25 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_2P1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P1J-query.scw
PDB file :
Tito_Scwrl_2P1J.pdb
: