Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSKITIASDAVNVIIEISANAEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAKKIVESAIKSRN
3EMJ Chain:E ((15-172))
-----------EINVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLEKGKWVKVTGWGDKVKAETLIKEGI-DR-
General information:
TITO was launched using:
RESULT:
Template:
3EMJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99277 for 1199 contacts (-82.8/contact) +
2D Compatibility (PS) -17159 + (NN) -5376 + (LL) 828
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -141634.0 ( -118.13 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_3EMJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EMJ-query.scw
PDB file :
Tito_Scwrl_3EMJ.pdb
: