Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGAVQIKKTGGPEVLEFIDKSIGEPKGEEVLIRHTAIGLNRYDLEHRKGVRKIKGLPSVLGVEAVGVIEKLGKKI---DDSLQIGDRVGYCTAPPGAYCEKRVIHQKYLVKIPDEIPDEVVAAVLFKGMTAHYLINQSYKIKPGAFVLVHGANGGLGQIICQWAKDKKGVVIGSVSSDKKMEVALQNGCTYAINYNDK--NFVSKIMEITQNRGVGAVYDPIGYSTSRLSFESLSKFGIYVSYGQISG-IAPVSFSLLSSR-SLFATGTSIYHYKRDRFALVLTAMEIFEMVKKKLLTVRINKKYKFDEIIKAHHDMENRKVSGLNIIKVF |
| 4RVU Chain:B ((7-326)) | ---AIEVTETGGPGVLRHVDQPQPQPGHGELLIKAEAIGVNFIDTYFRSG-QYPRELPFVIGSEVCGTVEAVGPGVTAADTAISVGDRVVSASAN-GAYAEFCTAPASLTAKVPDDVTSEVAASALLKGLTAHYLLKSVYPVKRGDTVLVHAGAGGVGLILTQWATHLGVRVITTVSTAEKAKLSKDAGADVVLDYPEDAWQFAGRVREL-GGTGVQAVYDGVGATTFDASLASLAVRGTLALFGAASGPVPPVDPQRLNAAGSVYLTRPSLFHFTRTGEEFSWRAAELFDAINSEAITVAVGGRYPLADALRAHQDLEARKTVGSVVLLP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201098 for 2736 contacts (-73.5/contact) +
2D Compatibility (PS) -33733 + (NN) -15037 + (LL) 508
1D Compatibility (HY) -16400 + (ID) 5500
Total energy: -271260.0 ( -99.14 by residue)
QMean score : 0.440
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