Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKEKLFYTIGEVAEELHLEQHVLRFWESQFRQIKPI-KR-KGRRLYDHKCIEVIKKIKYMLYDKGYTIKGVQKEFDNNIKSSCNFGNLLPQLIDLRDYLINKINSEKSNEQL
3HH0 Chain:A ((1-74))
-----LAWLISEFASVGDVTVRALRYYDKI-NLLKPSDYTEGGHRLYTKDDLYVLQQIQS-FKHLGFSLGEIQNIILQRDIETEVFLRQMHFQREVLLAEQERIAKVLSHMDE
General information:
TITO was launched using:
RESULT:
Template:
3HH0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44686 for 454 contacts (-98.4/contact) +
2D Compatibility (PS) -7385 + (NN) -1117 + (LL) 700
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -58088.0 ( -127.95 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3HH0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HH0-query.scw
PDB file :
Tito_Scwrl_3HH0.pdb
: