Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKALITCFIFLVCSFTRSYASDDVHLEKSETELYEEAVELFDQKKYKQAIRAFRKIEDLYPFSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRVLSYY-MQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVRLITDHILKKEYSIGKFYFRRGEYLAAIKRFQNII-SSKDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAENLKENTVEQ |
2VQ2 Chain:A ((5-179)) | ---------------------------NQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKN---ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDS---AEINNNYGWFLCGRLN--------RPAESMAYFDKALA-DPTYPT--------------PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQF---PPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71824 for 1382 contacts (-52.0/contact) +
2D Compatibility (PS) -18619 + (NN) -8820 + (LL) 5672
1D Compatibility (HY) 3600 + (ID) 950
Total energy: -90941.0 ( -65.80 by residue)
QMean score : 0.527
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