Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKSGGGSCNGRDSAGCRLGIKKNG--KVIPGNIIVRQRGTKFHPGKNVGMGKDHTIFAKVEGWIRFRKSVN-KKTFIDIVPVDNV
3J7Z Chain:W ((7-85))
------GGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE---
General information:
TITO was launched using:
RESULT:
Template:
3J7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4243 for 487 contacts (-8.7/contact) +
2D Compatibility (PS) -8117 + (NN) -1720 + (LL) 540
1D Compatibility (HY) -4000 + (ID) 2050
Total energy: -19590.0 ( -40.23 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Z-query.scw
PDB file :
Tito_Scwrl_3J7Z.pdb
: