Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDDKKTTIEEEKGILGWIEYRLPIFSFLKHTASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDHAFNSVERIMRDVNYGWLIRYTHAVGASLFFMVVYVHMMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGATVITNLFSAVPLVGNKIVMWLWGGFSVDNPTLNRFFALHYLLPFVIIALAMLHIIALHRFGSGNPSGVEVK------SGKDTIPLYPYYIVKDCITFGLFFIVLFAFVFYAPNYLGHPSNYIEADSMVTPVHIVPEWYFLPFYAMLRS------------------IPDKLTGVLTMFGSILVWFLLPWLDKAKVKSGAYRPLFKKFFLVFAVNFAFLAWLGGQEVKEPYITLSRLSTLYYFAYFMVVLPLLSKYEKPEELPKTISDSVPEMK |
2QJP Chain:D ((8-425)) | ---------EPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -321593 for 3027 contacts (-106.2/contact) +
2D Compatibility (PS) -40337 + (NN) -17854 + (LL) 664
1D Compatibility (HY) -60000 + (ID) 11450
Total energy: -450570.0 ( -148.85 by residue)
QMean score : 0.408
|
|
|