Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MITLDGRLVA----H-KHINVNKGELAHRHSTLAGGKPVLCP-VLKVEKGKITYIGNNSEHYKPALANLYNAVKN
3IV1 Chain:A ((1-78))
GSSLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEV-AEVDKNIELLKKKDEELSSALEK
General information:
TITO was launched using:
RESULT:
Template:
3IV1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5404 for 246 contacts (22.0/contact) +
2D Compatibility (PS) -6674 + (NN) -46 + (LL) 204
1D Compatibility (HY) -800 + (ID) 550
Total energy: -2462.0 ( -10.01 by residue)
QMean score : 0.010
(partial model without unconserved sides chains):
PDB file :
Tito_3IV1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IV1-query.scw
PDB file :
Tito_Scwrl_3IV1.pdb
: