Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MHDIDKQLQEQVNNLDRTEKSAAELERKIQEHKEEFMKKEKKQTTGRDKYRAYKKEQNSF
4WXA Chain:D ((2-112))
KLPVAQYSAPDGVEKSFAPLTYLGQLRTQLTGLQDDINEFLTGRMELAKNKKKAGADEKRIQEEINQL
General information:
TITO was launched using:
RESULT:
Template:
4WXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 19827 for 251 contacts (79.0/contact) +
2D Compatibility (PS) -6689 + (NN) -2705 + (LL) 0
1D Compatibility (HY) -800 + (ID) 450
Total energy: 9183.0 ( 36.59 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_4WXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WXA-query.scw
PDB file :
Tito_Scwrl_4WXA.pdb
: