Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYQYYNRIFNILLIIVLLLSNVTYADASESMHQIGSDIVVGLLKTEKETYPHELGLFQSIYEMFNSFGVRTVFIDCNKIINLKKIQEELLSLLKQDEMLAKKLILDRIKIEIGQFIKGHKINRIFIPENYYNLHSEPFPPTPCCQLVTEAIVKIVDDNPTIHLLSICGGLQGIMSAKGIEVVHVENFVSDEEQRRSHLKSAPNPQQEDVTFQQIKIVPNSHLAKVVAKFLLPDKNGWFSTCFPDAHSGTVNNRPENRRKLELLGYKIAAFSNDGVIEAIEDK-HGNIYFQSHPEALVVKSDKNLHLSNHKARQVSTLVAMAIINDFLYRA |
| 2YWB Chain:A ((13-177)) | ---------------------------------------------------------RLIARRLRELRAFSLILPGDAPL--------------------------------EEV-LKHRPQALILSGGPRSVFD-PD---------APRPDPRLFSS-GLPLLGICYGMQLLAQELGGRVER---A--------------------EYGKALLTRH-EGPLFRGLE----------GEVQVWMSHQDAVTAP--------PPGWRVVAETEENPVAAIASPDGRAYGVQFHPEVAHTPKGMQILENFLELAGVKRDWTPEHVLEELLRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84408 for 1270 contacts (-66.5/contact) +
2D Compatibility (PS) -17148 + (NN) -1204 + (LL) 10808
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -94652.0 ( -74.53 by residue)
QMean score : 0.285
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