Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARACVFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMT-DSILIGPGLGVDFKGNNAITFLLQNIQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEE---QTYERNREAVDRLGATVVLKKHGTEIFFKDEDFKLT-IGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSATYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES |
| 3RQH Chain:A ((18-251)) | --------------LPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLTADCP---VILDAGALAKRTYPKREGP---VILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHGACAE--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140771 for 2049 contacts (-68.7/contact) +
2D Compatibility (PS) -24947 + (NN) -9742 + (LL) 3112
1D Compatibility (HY) -8800 + (ID) 4050
Total energy: -185198.0 ( -90.38 by residue)
QMean score : 0.518
|
|
|