Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQPLVVVCHALTGNHLTYGTDDYPGWWREIIDGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKKLTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRTSSYSR--AFNEIARQAIHLGGKEGLSIARQLGFLTYRSSKSYDERFTPDEVVAYQQHQGNKFKEHFDLNCYLTLLDVL----DSHNIDRGRTDVTHIFKNLETKVLTMGFIDDLLYPDDQVRALGERFKYHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
| 3G9X Chain:A ((17-294)) | ----------------------------VLGERMHYVDVGPRDGTPVLFLHGNPTSSY---------LWRNIIP--HVA-PSHRCIAPDLIGMGK-SDKPD-----LD-YFFDDHVRYLDAFIEALGLEEV-VLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRT-ADVGRE--LIIDQNAFIE-GALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIG-PGLHYLQEDNPDLIGSEIARWLPALH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182815 for 2321 contacts (-78.8/contact) +
2D Compatibility (PS) -29226 + (NN) -6690 + (LL) 1644
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -228487.0 ( -98.44 by residue)
QMean score : 0.419
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