Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSLKT-VI-----------GMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKL-TKPLKNKEVKSVEHVRRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDNIVLYAISKDRHDYVKLTTTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTI-SVEKMNAILFDDSTIVRSSKSGVT-TYNNNTGVANYNDKNEKYHYKNLSEDEASSSKMEETIPGTFDFINGH----GGFLNEDFRLF-STNNQSGELTYQRFLNGYPTFNKEGSNQIQVTWGEKGVFDYRRSLLRTDVVLN---SEDNKTLPKLESVRSSLANNSDINFEKVTNIAIGYEMQDNSDHNHIEVQINSELVPR------WYVEYDGEWYVYNDGRLE |
| 4RUW Chain:A ((53-438)) | RRDLRVMTWNIHTAVAPDAPGVVDEPRIAAVIRAEAP--DVVVLNEVHRDAP------GPGSHGDQPARLAELLAADGYVH-TWFGLTEVDLPHEGAVLPGSSNGNVVMSR---HPFVGGGVVVPLPNENYEPGGKLRRSLLTVTVDVP---GLGDVVVHATHLSTPGS-AVLVEDQKEQLRIVLDHVDARVP------------------SVLAGDL-----------------NIWTTDVPTQPYS----QNNLMQSWIAEDHLADTWRQVNDPGAGPTMTASYGRPESPHPDRRIDYVFA----------------TPAFDVVAGHVSLVDRFASDHLGVVMDLRLGGAPVAARTVLAGEDGLD--GWAQLTAS---------RPGRLRLSVCKNRGQADDDGT-----AVRAVLRNRAGVALRTVTD--------SGTSRDRCTVETWRGALPPGARLEACLVGADGTILASRTETL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 59044 for 2936 contacts (20.1/contact) +
2D Compatibility (PS) -37741 + (NN) -1874 + (LL) 6752
1D Compatibility (HY) -10400 + (ID) 3700
Total energy: 12081.0 ( 4.11 by residue)
QMean score : 0.140
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