Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYTGSLYLSLISLLQNHTFQPEEKVCLFSYGSGAVGEIFSGSIVKGYDKALDKEKHLNMLESREQLSVEEYETFFNRFDNQEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK |
1XPM Chain:D ((278-384)) | IYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHKALLNNRTEVSVDAYETFFKRFDDVEFDEEQDAVHEDRHIFYLSNIENNVREY---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 7316 for 500 contacts (14.6/contact) +
2D Compatibility (PS) -10758 + (NN) -1876 + (LL) 412
1D Compatibility (HY) 7600 + (ID) 350
Total energy: 2344.0 ( 4.69 by residue)
QMean score : 0.110
|
|
|