Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYDDFI--VGETFKT-KSLHITEEEIIQFATT-FDPQYMHIDKEKAEQSRFKGIIASGMHTLSISFKLWVEEGK-YGEEVVAGTQMNNVKFIKPVYPGNTLYVIAEITNKKSIKKENGLVTVSLSTYN-ENEEIVFKGEVTALINNS
2C2I Chain:A ((5-149))
ESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRY---
General information:
TITO was launched using:
RESULT:
Template:
2C2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14620 for 966 contacts (-15.1/contact) +
2D Compatibility (PS) -14514 + (NN) 915 + (LL) 300
1D Compatibility (HY) 1200 + (ID) 1300
Total energy: -28019.0 ( -29.01 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_2C2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C2I-query.scw
PDB file :
Tito_Scwrl_2C2I.pdb
: