Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDNEKRVLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLVNEVGEGDSTKSGGRKPILLKVNHLYGYFISLDLTYSSVEVMYNYFDGNVIKHESYDLPDEKVSSILSIIKK-HIDIQ-EKLDTYNGLLGVSVSIHGVVDNEQH-VTYLPFHETEGISIAKKIKEITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKVSDNV-E-IFHKIEDIFSQEALLHNLSNQLNE----------KMTLSKLIQFYNEKNPVVVEEMEQFINKIAVLIHNLNTQFNPNAIYINCPLFNEMPEILEAIKNQFKQYSR----NEIQIKLTSNVKFATLLGGTLAIIQKVLQINDIYLDIKA |
| 1Z05 Chain:A ((38-416)) | -QINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTVQEA-ISRGRPAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQATMPGAALIKQA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205371 for 2951 contacts (-69.6/contact) +
2D Compatibility (PS) -38300 + (NN) -10609 + (LL) 1668
1D Compatibility (HY) -19200 + (ID) 3900
Total energy: -275712.0 ( -93.43 by residue)
QMean score : 0.502
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