Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELIGDKSTVQQAIHALQLIGFENVKSYRLPQTNIVTSSIHSSEMTGEEHNVLDVRNDDEWR---KGHLKQAIHIPHGKL--LNEDIPFDKNDLIYVHCQSGVRSSIAVGILEYKGFTNIVNVRGGYQHLPAFLK
1QXN Chain:B ((41-116))
--------------------------------------------------TLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLLAKSGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGG---------
General information:
TITO was launched using:
RESULT:
Template:
1QXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43056 for 467 contacts (-92.2/contact) +
2D Compatibility (PS) -8004 + (NN) -3515 + (LL) 4544
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -55231.0 ( -118.27 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1QXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QXN-query.scw
PDB file :
Tito_Scwrl_1QXN.pdb
: