Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVNLLVKSK
2HH7 Chain:A ((7-88))
-AKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGH-GQAAIEELIDAVKF--
General information:
TITO was launched using:
RESULT:
Template:
2HH7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3050 for 446 contacts (-6.8/contact) +
2D Compatibility (PS) -8553 + (NN) -497 + (LL) 216
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -18584.0 ( -41.67 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2HH7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HH7-query.scw
PDB file :
Tito_Scwrl_2HH7.pdb
: