Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPTVVIDLVDQLKGNYSIKLILEVLNIPKSTYYRWKNKTYKN-------------DTVTQKVIELCEANHYTYGYRKITALINQCYTSPINHKRVQRMMQKHHLNCRVRPKKTTRIGKPYYKTDNLLQR
1U78 Chain:A ((8-104))
-SDTERAQLDVMKLLNVSLHEMSRKISRSRHCIRVYLKDPVSYGTSKRAPRRKALSVRDERNVIRAAS-N-SCKTARDI----RNELQLSASKRTILNVIKRSG--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1U78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39285 for 499 contacts (-78.7/contact) +
2D Compatibility (PS) -9041 + (NN) -3671 + (LL) 2380
1D Compatibility (HY) 1600 + (ID) 450
Total energy: -48467.0 ( -97.13 by residue)
QMean score : 0.732
(partial model without unconserved sides chains):
PDB file :
Tito_1U78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U78-query.scw
PDB file :
Tito_Scwrl_1U78.pdb
: