Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQGWWFPVMASAFLIFTIVIMFIAGTGQYGLGE-----KGTVDAFVNGASSLVGVSLIIGLARGINLVLNKGMISDTILHFSSSIVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNVRYSHWLRFVWPVVAFVLIFGGGLLITQVLIYS |
| 2LNY Chain:A ((1-20)) | ----------------------MAAVAGLYGLGEDRQHRKKQ------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1153 for 44 contacts (-26.2/contact) +
2D Compatibility (PS) -1533 + (NN) -137 + (LL) 16140
1D Compatibility (HY) -800 + (ID) 400
Total energy: 12117.0 ( 275.39 by residue)
QMean score : 0.132
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