Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLMEKILYQTDEFKLKPSGWYKTIPPKKDGGTEFEIMLSGPIAFTDRFIDPATRKEKVFLSDLNNIELVEKASILTALQLPSLIEYGFTINEKHIRDLGFVLQQMRSTTPLSTIYSGVGMLHTLLGPLISLDQPYFSNEITNSTSIICDNKYDLIPKGNLSEWLQMYKEEVHGNLSLELDVLFGVSSLVTAFLKYHNNVEFSGTIFSFTGQSSTGKSTAAMLAASVAGNPTKG--TENLFRSWN----ATRNALEGYLSGNYGVPIVLDELSAATFHDTTGLLYSFAEGQGRQRANINGDVKTPKN |
3D8B Chain:A ((116-208)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSL-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3850 for 345 contacts (-11.2/contact) +
2D Compatibility (PS) -7340 + (NN) -3655 + (LL) 14520
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -2625.0 ( -7.61 by residue)
QMean score : 0.187
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