Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSSLQRLMGIIISENLIECVKVAADDEESSQELINEAVNLLVKSK
2HH7 Chain:A ((4-88))
ELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGHGQAAIEELIDAVKF---
General information:
TITO was launched using:
RESULT:
Template:
2HH7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 662 for 459 contacts (1.4/contact) +
2D Compatibility (PS) -8576 + (NN) -266 + (LL) 100
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -14030.0 ( -30.57 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_2HH7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HH7-query.scw
PDB file :
Tito_Scwrl_2HH7.pdb
: