Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKENFWSELPRPFFILAPMED-------VTDIVFRHVVSEA-ARPDVFFTEFTNTESFC--HPE---G--IHSV--RGRL--TFSEDEHPMVAHIWGD----------------------------------------KP------------EQFRETSIQLAKMGFKGIDLNMG---------CPVANVAKKGKGSGLILRPDVAAEIIQATKAG--GLPVSVKTRLGYYE--------IDEWKDWLKHVFEQ------DIANLSIHLRTRKE-------MSKVDA-HWELIEAIKNLRDEIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL |
| 2HSA Chain:B ((24-366)) | ----MGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAG-GFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY-----QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAP------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84631 for 1872 contacts (-45.2/contact) +
2D Compatibility (PS) -25750 + (NN) -13294 + (LL) 7640
1D Compatibility (HY) -5200 + (ID) 2100
Total energy: -123335.0 ( -65.88 by residue)
QMean score : 0.407
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