Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLSITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK |
1A2X Chain:B ((3-33)) | -----------------------------------------------------------------------------------------EEKRNRAITARRQHLKSVMLQIAATELEKEE---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 992 for 114 contacts (8.7/contact) +
2D Compatibility (PS) -3230 + (NN) -2080 + (LL) 11032
1D Compatibility (HY) -400 + (ID) 400
Total energy: 5914.0 ( 51.88 by residue)
QMean score : 0.292
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