Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLNKLVLGIIFLFLVISITAGCGIG----KEAEVKKSFEKTLSMYPIKNLEDLYDKEGYRDDQ-------FDKNDKGTWIINSEMVIQPNNEDMVAKGMVLYMNRNTKTTNGYYYVDVTKDEDEGKPHDNEKRYPVKMVDNKIIPTKEIKDKNIKKEIENFKFFVQ--YGNFKDLSKYKDGDISYNPEVPSYSAKYQVTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGENIYFSDSLHLEPSEDK |
| 3TD7 Chain:A ((35-295)) | HNGLITKIWGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNNKLEVDYGLSYEDVVNKYESFRAKCGKVTPLDHKAFSFKKLYYMDAPIVSLDKVENFVRIARMRGISDKYFAFLELATVLNGDFNELKK--QSSWEYRNKYAQKKIRHMRENAIPSIEEQGYWKGTPTIDELKLLLFLASNL----------NRTEVNDAINNVERLESTHYIEN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 60957 for 1641 contacts (37.1/contact) +
2D Compatibility (PS) -24636 + (NN) -607 + (LL) 388
1D Compatibility (HY) -1600 + (ID) 1800
Total energy: 32702.0 ( 19.93 by residue)
QMean score : 0.093
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