Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MKRLNKLVLGI-SFLFLVISITAGCGMGKEAEIKK-SFEKTMSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIVNSQMAIQNKGEPMKSKGMVL----YMNRNTRTTNGYYYVNVIKGEDKGKHQDNEKRYPVKMVDNKIILTKEIKDE-NIKIEIENFKFFVQYGNFKDLENYKDG----DISYNPEVP---SYSAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKG-SSVGYKD-IEFTFVEKKEENIYFS--DGLIFKP-SEDK |
| 4RWR Chain:A ((55-323)) | VYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYKSKEELKKQWGNNYENNLKKIEEAVSKTAGQVLTYEGKPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASP-KFTSEQIFTVADFQKRLGVKV--------LADGKVGDIKGRTEGKRVKDVAFQGKTLTGRDVRDKLELRSSDFTWKQEGDKIVVTTK--------GFGHGVGMSQYGANGMAA---EGKKYTDIVAHYYKGVEIKTMNDY- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 60108 for 1709 contacts (35.2/contact) +
2D Compatibility (PS) -24631 + (NN) -121 + (LL) 2088
1D Compatibility (HY) -400 + (ID) 1900
Total energy: 35144.0 ( 20.56 by residue)
QMean score : 0.064
|
|
|