Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKEDKMIEIRRYLHQHPELSFHE---DETAKYIAEFYKGKDVEVET-NV----GPRGIKVTIDSGKPGKTLAIRADFDALPITED-TGLSFASQNKGVMHACGH---DAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGVLDGVDHVLGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHG-SSPHMANDAIVAGSYFVTALQTVVSRRLSPFETGVVTIGSFDGKG-QFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGVTCTLEYNDDYPALY---NDPEFTEYVAKTLKEANLDFGVE-MCEPQPPSEDFAYYAK-ERPSAFIYTGAAVEDGEIYPHHH-PKFNISEKSLLISAEAVGTVVLDYLKGDN |
| 1CG2 Chain:A ((7-392)) | -DNVLFQAATDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKG-RGGKNLLLMSHMDTVYLKGILAKAPFRVE-GDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEAK-LADYVLSFEPTSA-GDEKLSL--G--TSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDK----AKNLRFNWTIAKA-GNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQKKL-PEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKEA---GGTLGVEERTGGGTDAAYAALSGKPVIE-SLGLPG-----FGYHSDKAEYVDISAIPRRLYMAARLIMDLGAG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125309 for 3097 contacts (-40.5/contact) +
2D Compatibility (PS) -39391 + (NN) -18217 + (LL) 944
1D Compatibility (HY) -4000 + (ID) 3100
Total energy: -189073.0 ( -61.05 by residue)
QMean score : 0.492
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