Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMIGSSFIPLQRVLMYF-INPNDSMDQFTLEVL----RLPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFIAFFSHLTIHLLPLF-------AVLGGAVAMMILLVFQTKG----QIR-PTILIIIGISMQTLF----------IALVQGLLITTKQLSAAKAYTWLVGSLY---GATFKDTIILGMVILAVVPLLFLVIP---------KMKISILDDP--------------VAIGLGLHVQRMKLIQLITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGRTLFLPKE---------VPA-------GVFIAAFGA----PFFIYLLLTVKKL------- |
| 4IND Chain:A ((6-383)) | --LGQSFPANAKVKYYYKLSEKQDLDAFVNSIFVGSYKLKQISYLLYGNTKIVSAPVVPLGPNASIIIDDEL----QEGLYLIRIKVYNTNSFSVTVTPFFNNNNTMTYSIGANSEFEIYDIFTKEQGNIYYIQLPPGLAILEFSLERVFEKGNRINIPKIIHTSGNGYISFRLRKGTYAIKMPYSYNNTTSTTFTNFQFGTISTSATIPLVISSIPANGSGSGTFLVYLKITGDYEDVKFSVTYGGGLGVPFTFGLEVEEIN--ELVENTNFVTQSVTLSGSQVTQSILNVQGSGSHLRLKYASVSGLTTAVTQCQLQATNLNRSTTYSTVWDFIAGGSSTPPSWDIREINSIQLVANGGSSTSSVTITLILVYEQIAGELSHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -321086 for 1958 contacts (-164.0/contact) +
2D Compatibility (PS) -31301 + (NN) 12802 + (LL) 1084
1D Compatibility (HY) -13200 + (ID) 2700
Total energy: -354401.0 ( -181.00 by residue)
QMean score : 0.076
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