Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METIKQ----EVRESIVKGIIAGYKDYVNERNEVKKRMVI--SDAYAFTKSN-HIESQVAKHLENFVKYIKENAGPSWKY---LKFIFNKDEEK------NNIMFIL-KN-ED-YFDEKNVSVGKSLVADKNPKSKN-YLEV-------LMAKNRDINFGTV--------------GEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITYRIDKESKQLAAIKQWLPNPETNS-AIMVDDLTEL-IEKVIVERED------YHIDEEELEVLKNDGELE-----LIDVEHAFGISID-EGN-DMIESER |
| 4OVY Chain:A ((1-305)) | EEPLPSWNDSAARRAILEYVKSVTTEGSPRFVPVSERIVTFDNDGTLWCEQPMYVQLAFALDR---VRLLADKH-PEWRTEEPFRAVIEKDLPALAKLGAKGLTELTMATHAGMTDDEFENIVTEWIRKARHPKFHRPYTECVYQPMLELLAFLRQHEFKTFIVSGAGIEFMRPWAKEVYGIPPEQVIGSSVKLKYELRDGKPVLVRLAELNFIDDQAGKPVGIRQVIGRR--PVMAVGNSDGDYEMLEYVTSGPANGLGLIVHHTDAVREFAYDRQSPFGRLDRALTDATSKGWIVIDMQRDWKVIFPES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 54224 for 1605 contacts (33.8/contact) +
2D Compatibility (PS) -24706 + (NN) -1115 + (LL) 140
1D Compatibility (HY) 6000 + (ID) 900
Total energy: 33643.0 ( 20.96 by residue)
QMean score : 0.210
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