Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRWCKIRNSHIGEYSYIGF--GSDFNN------------VEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNNPFNIKQKFIDFNDQPSRTTIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYEVVGGVPAKVIKKRFDNKTIEKLLESKWWEKTPDKLKGFSVEYLNKKDT
3DHO Chain:F ((26-182))
---------------------------------------------KLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWW--------------------
General information:
TITO was launched using:
RESULT:
Template:
3DHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72118 for 977 contacts (-73.8/contact) +
2D Compatibility (PS) -15743 + (NN) -10838 + (LL) 4036
1D Compatibility (HY) -12800 + (ID) 2850
Total energy: -110313.0 ( -112.91 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3DHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DHO-query.scw
PDB file :
Tito_Scwrl_3DHO.pdb
: