Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSN----------IV-----QD-PRVLKQIETIKGVTNDYKIVGMNNSQATNRRLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDVLLMVYLSNYK-KANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYKKEANVITNAPILNDSREF-KEIENFKEIVYQGQIVMDRGYEEFIIASSAFKQNAPSFIIRGFGPHEEVIKELISYNSENIRLDKPVEVKELVDKLAESNVGVILTKPVSI---N-FEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVT---PLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF |
| 2IUY Chain:A ((4-333)) | LKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG---RPGLTV-VPAG------------------EPEEIERWLRTADVDVVHDHSGGVIGP---AGLPPGTAFISSHHFTTR----------------------PV-NPVGCTYSSRAQRAHCGG--G-DDAPVIPIPVDPARYRSAADQVAKEDFLLFMGRVSPHKGALEAAAFAHA---CGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPS--VGEVVGYGTDFAPDEARRTLAGLPASDEVRR-------AAVRLWGHVTIAERYVEQYR- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -143377 for 2725 contacts (-52.6/contact) +
2D Compatibility (PS) -32066 + (NN) -3307 + (LL) 4836
1D Compatibility (HY) -400 + (ID) 2250
Total energy: -176564.0 ( -64.79 by residue)
QMean score : 0.413
|
|
|