Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPE--YVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSK----------------TEMHRGIRIRRLKYSRFNNK-----------SKVGRIINFFSLF---SKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRP-GS---------MIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNH-QI-----SKNADN---IHVIPNWYDMRQLQDNRIY------------------NDTFKAY--REQYDKILLYSGNMGQLQDMETLISFLKLNKDQPQTLTILCGHGKKF--ADVKTAIEDHRIENV-KMFEFLTGTDYADVLK-IADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQY---------DAGIQIDNGDAHAIYNFINTH-S----SKELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 1RZU Chain:A ((1-473)) | ---MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGV-IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS-LGGRLVVLGAGDVALEGALLAAASRH-HGRVGVAIGY--NEPLSHLMQAGCDAIIIPSRFEPCGLT----QLYALRYGCIPVVA--RTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189459 for 3293 contacts (-57.5/contact) +
2D Compatibility (PS) -40489 + (NN) -9862 + (LL) 1444
1D Compatibility (HY) -4000 + (ID) 2100
Total energy: -244466.0 ( -74.24 by residue)
QMean score : 0.374
|
|
|