Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MNGKKANTINRYKYFHHVNHQKIQQSS------KKTLWASLIITLLFTVIEFVGGLVS---NSLALLSDSF---HMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILVAFLNGLALIVIS------------IWILYEAIVRIIYPQPIESGIM--FMIASIGLLVNIILTIILVRSLKQEDN---------------------INIQSALWHFMGDLLNSIGVIVAVVL---------IYFTGWRIIDPIIS----------IVISLIIL------RGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVH---------------EFHLWSITTEHYSLSAHVVLDKKYEGDDY-QAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT-------------------------------------------------------- |
| 5DA0 Chain:A ((14-484)) | QREWFANPRKDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKLARYLKFVPRSVMVGFVNALAILIFMAQLPQFVGANWQMYAMVAAGLAIIYLLPLVFKAMPSALVAIVVLTVVAVVTGADVKTVGDMGTLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQSMINVTSGGRGRLSTFVAGAFLMVLILALQPLLVQIPMAALVAVMMVVAISTFDWGSLRFPKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFFARKVSQLSQVTPVDEVDGTRTYRVRGQLFFVSTHDFLHQFDFTHPARRVVIDLSDAHFWDGSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178383 for 2448 contacts (-72.9/contact) +
2D Compatibility (PS) -32825 + (NN) -6803 + (LL) 0
1D Compatibility (HY) -23200 + (ID) 2600
Total energy: -243811.0 ( -99.60 by residue)
QMean score : 0.272
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