Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------MDKESVVASLARNKKIAVETMAGQRYIIERILHTNDEKHIHILKPKDVVLDVDSIKEIDENHLNDAT---- |
| 1PFJ Chain:A ((1-108)) | MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8300 for 373 contacts (22.3/contact) +
2D Compatibility (PS) -6903 + (NN) 2522 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 1769.0 ( 4.74 by residue)
QMean score : 0.255
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