Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPV--------LLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAG-------------FVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVR-DIEPQYLKIAA--NLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFG--------------FIIDRFISYIEQFILRRFGE |
4TXA Chain:A ((6-399)) | PQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGLCSGVEDTKHYEEAKKCVEELALYLKPVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPARQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTG---DPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232012 for 1731 contacts (-134.0/contact) +
2D Compatibility (PS) -25240 + (NN) -1981 + (LL) 504
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: -264629.0 ( -152.88 by residue)
QMean score : 0.239
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