Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRKRKWLIVICVLLVLITISQILKHFNYGTESKEAYNTYTVEKERQLDLQGKAYPREVKTYYKNNQVGTYLGVQVADGQTVKKGDMLINYKINSNKRQQLVDKINDTQHIITEVYLNITKGLNNREIQKKLIEYKQTLYEAQQQLYQYDSQNRDSMYASFDGKIMIKNIDN-DSDNQPILYLISK-ESHIKTSVTEFDLNKVKKGDKVNLSITSTGKTGAGIIKQISELPISYEENLSLHENDALHLPESNNDGELANSKSISASPIFKSNNNSELSKYGVIIDDLSLPIRAGYSLEIKVPLNAIKIPKSVLTKGNNVFIVNKNSIVEKRNIRIKRINGDIIVEKGLKPGDKLIKQPKSTMNDGDKVEISS |
| 3CDX Chain:A ((267-342)) | ----------------------------------------------------------DAYVM-APRTG-LFEPTHYVGEEVRTGETAGWIHFVEDVD-----------------------------------------------------TAPLELLYRRDGIVWFGAGPGRVTRGDAVAVVMEDYND--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13572 for 482 contacts (-28.2/contact) +
2D Compatibility (PS) -7671 + (NN) -2336 + (LL) 19520
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -6759.0 ( -14.02 by residue)
QMean score : 0.461
|
|
|