Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKYEHIAKQLNAFIHQSNFKPGDKLPNVTQLKERYQVSKSTIIKALGLLEQDGLIYQAQGSGIYVRNIADANRINVFKTNGFSKSLGEHRMTSKVLVFKEMATPPKSVQDELQLNADDTVYYLERLRFVDDDVLCIEYSYYHKEIVKYLNDDIAKGSIFDYLESNMKLRIGFSDIFFNVDKLTSSEASLLQLSTGEPCLRYHQTFYTMTGKPFDSSDIVFHYRHAQFYIPSKK
4EGZ Chain:B ((24-87))
--KYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFV------------------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4EGZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41611 for 414 contacts (-100.5/contact) +
2D Compatibility (PS) -7170 + (NN) -6247 + (LL) 11532
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -50246.0 ( -121.37 by residue)
QMean score : 0.794
(partial model without unconserved sides chains):
PDB file :
Tito_4EGZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EGZ-query.scw
PDB file :
Tito_Scwrl_4EGZ.pdb
: