Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFKKVLVATAMVGVLATGVVGYGNQADAKVYSQNGLVLHDDANFLEHELSYIDVLLDKNADQATKDNLRSYFADKGLHSIKDIINKAKQDGFDVSKYEHVK
2K5J Chain:A ((16-49))
------------------------------------------------------------LSNEVIKQLDDLEVQRN-LPRADLLREAVDQYLIN-------
General information:
TITO was launched using:
RESULT:
Template:
2K5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3545 for 153 contacts (-23.2/contact) +
2D Compatibility (PS) -3622 + (NN) 20 + (LL) 5212
1D Compatibility (HY) -800 + (ID) 150
Total energy: -2885.0 ( -18.86 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_2K5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5J-query.scw
PDB file :
Tito_Scwrl_2K5J.pdb
: